It wont throw me an output file or an error, and the version I am using is
V15.00
On Thu, Jun 9, 2016 at 12:17 PM, Daniel Roe <daniel.r.roe.gmail.com> wrote:
> Can you please post your entire cpptraj output? Also, what version of
> cpptraj are you using?
>
> -Dan
>
> On Thu, Jun 9, 2016 at 1:14 PM, Aishani Prem <aishaniprem.gmail.com>
> wrote:
> > Hi,
> > I am trying to get the RMSD of the backbone atoms for a specific
> set
> > of residues in my simulations. My input file looks like:
> > trajin pdb_nocut.mdcrd
> > reference pdb_nocut.rst
> > autoimage
> > rms reference mass out pdb_backbone_nocut_cpptraj.rms .N,CA,C,O :76-112
> > time 0.1
> >
> > When I run this , I dont get any error but my output file is not
> generated
> > either. Am I doing anything wrong?
> > --
> > Thank You and Regards,
> > Aishani Chittoor Prem
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
>
>
>
> --
> -------------------------
> Daniel R. Roe, PhD
> Department of Medicinal Chemistry
> University of Utah
> 30 South 2000 East, Room 307
> Salt Lake City, UT 84112-5820
> http://home.chpc.utah.edu/~cheatham/
> (801) 587-9652
> (801) 585-6208 (Fax)
>
> _______________________________________________
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> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Thank You and Regards,
Aishani Chittoor Prem
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Received on Thu Jun 09 2016 - 13:00:02 PDT
