[AMBER] RMSD for the backbone atoms of residues

From: Aishani Prem <aishaniprem.gmail.com>
Date: Thu, 9 Jun 2016 12:14:32 -0700

Hi,
      I am trying to get the RMSD of the backbone atoms for a specific set
of residues in my simulations. My input file looks like:
trajin pdb_nocut.mdcrd
reference pdb_nocut.rst
autoimage
rms reference mass out pdb_backbone_nocut_cpptraj.rms .N,CA,C,O :76-112
time 0.1

When I run this , I dont get any error but my output file is not generated
either. Am I doing anything wrong? 
-- 
Thank You and Regards,
Aishani Chittoor Prem
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Received on Thu Jun 09 2016 - 12:30:02 PDT
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