On Wed, Jun 1, 2016 at 7:37 PM, Angelina Malagodi <
angelinamalagodi.gmail.com> wrote:
> My installation process goes through these commands each time:
>
> tar jxvf AmberTools15.tar.bz2
> tar jxvf Amber14.tar.bz2
> cd amber14
> export AMBERHOME=`pwd`
> ./configure gnu
> source amber.sh
> make install
> echo "source $AMBERHOME/amber.sh" >> ~/.bashrc
>
You forgot to add $AMBERHOME dir to your .bashrc too.
That's why you got */amber.sh*
Any way, AmberTools16 is just released.
http://ambermd.org/#AmberTools
Hai
>
>
> On Wed, Jun 1, 2016 at 6:34 PM, Angelina Malagodi <
> angelinamalagodi.gmail.com> wrote:
>
> > Yes, ran the source command (MacBook-Pro:~ XX$ source $AMBERHOME/amber.sh
> > -bash: /amber.sh: No such file or directory)
> >
> > However, if I do MacBook-Pro:~ XX$ vim .bashrc, it indicates that source
> > /Applications/amber16/amber.sh
> > My understanding is that I should be able to open through cpptraj and
> > programs (such as tleap and xleap) if I have it correctly defined
> > amberhome.
> >
> >
> > Thank you so much for your help!
> >
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>
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Received on Wed Jun 01 2016 - 17:00:04 PDT
