My installation process goes through these commands each time:
tar jxvf AmberTools15.tar.bz2
tar jxvf Amber14.tar.bz2
cd amber14
export AMBERHOME=`pwd`
./configure gnu
source amber.sh
make install
echo "source $AMBERHOME/amber.sh" >> ~/.bashrc
On Wed, Jun 1, 2016 at 6:34 PM, Angelina Malagodi <
angelinamalagodi.gmail.com> wrote:
> Yes, ran the source command (MacBook-Pro:~ XX$ source $AMBERHOME/amber.sh
> -bash: /amber.sh: No such file or directory)
>
> However, if I do MacBook-Pro:~ XX$ vim .bashrc, it indicates that source
> /Applications/amber16/amber.sh
> My understanding is that I should be able to open through cpptraj and
> programs (such as tleap and xleap) if I have it correctly defined
> amberhome.
>
>
> Thank you so much for your help!
>
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Received on Wed Jun 01 2016 - 17:00:03 PDT
