Dear Amber Users,I am a beginner and I have plotted dssp plot using cpptraj for the first time using following script;> dssp.intrajin md-sim.ncsecstruct 1-263 out dssp.gnu sumout dssp.sum.agr
I wanted to know that what is None in dssp.gnu plot. I have read in amber manual that None is nothing just 0 integer. If it is correct so why cpptraj secstruct script plot None. Can I exclude this from dssp plot. Kindly help me.[set cbtics {"None", "Para", "Anti", "3-10", "Alpha", "Pi", "Turn", "Bend"} ]
Thanks
Best Regards, Saman Yousuf Ali
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Received on Sat Apr 09 2016 - 08:30:03 PDT
