I have almost the same problem. Which tutorial is suitable for ligand binding?
________________________________________
From: Carlos Simmerling [carlos.simmerling.gmail.com]
Sent: Saturday, February 27, 2016 1:39 PM
To: AMBER Mailing List
Subject: Re: [AMBER] How to analyze mutational free energy difference?
what is the process for which you want the free energy? ligand binding?
folding? activation? then we can suggest tutorials for that.
On Sat, Feb 27, 2016 at 2:34 AM, Mijiddorj Batsaikhan <b.mijiddorj.gmail.com
> wrote:
> Dear users,
>
> I want to make mutational free energy difference of protein structure
> (delta G = G wild-type - G mutant). If you do not mind, please give me
> advice, and suggestions of related tutorials.
>
>
> Batsaikhan
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>
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Received on Sat Feb 27 2016 - 05:00:09 PST
