[AMBER] Defining Units in nastruct

From: Robert Molt <rwmolt07.gmail.com>
Date: Sun, 21 Feb 2016 18:45:16 -0500

Good evening,

I was hoping to inquire what potential there is to change the matching
protocol in the resmap command. If I have a non-standard residue which
does not sufficiently closely map to A, G, T, C, or U, can I define the
unit otherwise?

In my particular case, I have a guanine with no N7 nitrogen. I cannot
run nastruct to identify the helix due to the poor matching.

If not, can someone suggest a place in the code to modify to "add" a unit?

-- 
Dr. Robert Molt Jr.
r.molt.chemical.physics.gmail.com
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Received on Sun Feb 21 2016 - 16:00:03 PST
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