[AMBER] MD study of transition of protein from one conformation to another

From: Abhilash J <md.scfbio.gmail.com>
Date: Mon, 28 Dec 2015 23:10:28 +0530

Hi!

  I have a protein which exists in two conformations. I have PDB files
(from RSCB PDB ) of both the conformations. I need to run a MD which starts
from one conformation and moves towards the other conformation (kind of
guided MD). I fear normal MD will either take too long if left unguided or
even not give any result.
  Please advice.

Regards

Abhilash
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Mon Dec 28 2015 - 10:00:03 PST