[AMBER] Question Regarding Input File Preparation

From: Ziheng Wang <zihengwang.sps.edu>
Date: Fri, 4 Dec 2015 02:35:49 +0000

Dear Amber users,

I am trying to generate prmtop and inpcrd files for a protein currently in mol2 format. I have tried to load the mol2 directly into tleap, change the naming to GAFF and load into tleap, convert to PDB and load into tleap, all without success. Can somebody recommend an approach?

The protein mol2 file is attached.

Thank you very much,

Ziheng Wang

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Received on Thu Dec 03 2015 - 19:00:02 PST
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