I have not tried the complicated system but seem to me cpptraj can do it
with '*makestructure*' command. check amber15 manual, page 549.
What I have in mind is to use tleap to generate linear structure, then
using cpptraj to tweak it.
Alternative you can google or try *modeller *program
Hope this help
Hai
On Wed, Oct 28, 2015 at 1:13 PM, Jagannath Mondal <jmondal.backup.gmail.com>
wrote:
> Dear all
>
> Is there a tool or method to generate coordinates of a model beta sheet
> structure for a given sequence ?
>
> Jagannath
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Received on Wed Oct 28 2015 - 10:30:04 PDT
