In $AMBERHOME/logs/test_at_serial, there should be a log file. Can you
send it? The error messages that you listed are too short to find the
problem.
Gerald.
On 07/02/2015 11:45 AM, ANWESHA SARKAR wrote:
> yeah i did that
>
>
>
> *Anwesha Sarkar*
>
> *Research Scholar*
>
> *Department of Biophysics,Molecular Biology and Bioinformatics*
> *University of Calcutta*
>
> On 2 July 2015 at 15:00, Gerald Monard <Gerald.Monard.univ-lorraine.fr>
> wrote:
>
>> Hello,
>>
>> Did you do 'source amber.sh' before running make test?
>>
>> Gerald.
>>
>> On 07/02/2015 11:16 AM, ANWESHA SARKAR wrote:
>>> Hi Amber users,
>>>
>>> I have installed Ambertools 15 without Amber. On completion of the
>>> installation procedure I had run the command make test. It gave me some
>>> errors which are listed below:
>>>
>>> 1.
>>>
>>> ./Run.comprehensive: Program error
>>> 2.
>>>
>>> make[3]: Target `test' not remade because of errors.
>>> 3.
>>>
>>> make[2]: *** [test.mmpbsa] Error 2
>>> 4.
>>>
>>> cd parmed/normag_prmtop &t' not remade because of errors.
>> ./Run.parmed
>>> 5.
>>>
>>> ./Run.parmed: Program error
>>> 6.
>>>
>>> make[2]: *** [test.parmed] Error 1
>>> 7.
>>>
>>> make[2]: Target `test.serial' not remade because of errors.
>>> 8.
>>>
>>> make[3]: Target.serial' not remade because of errors.
>>> 9.
>>>
>>> make[2]: [test.serial.sanderapi] Error 2 (ignored)
>>> 10.
>>>
>>> Testing the C LES API gcc -I/home/anwesha/amber14/include
>>> -L/home/anwesha/amber14/lib test.c -o testc -lsanderles
>>>
>>> (./testc && /bin/rm -f testc) || echo "Program error"
>>> 11.
>>>
>>> Testing the C++ LES API g++
>>> -I/home/anwesha/amber14/includeL/home/anwesha/amber14/lib test.cpp -o
>>> testcpp -lsanderles (./testcpp && /bin/rm -f testcpp) || echo
>> "Program
>>> error"
>>> 12.
>>>
>>> Testing the Python LES API (/usr/bin/python2.7 test.py) || echo
>> "Program
>>> error"
>>>
>>> I would like to know if these errors are serious errors and if yes please
>>> suggest me a way out.
>>>
>>> Thanks in advance
>>>
>>> *Anwesha Sarkar*
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
>>
>> --
>>
>> ____________________________________________________________________________
>>
>> Prof. Gerald MONARD
>> SRSMC, Université de Lorraine, CNRS
>> Boulevard des Aiguillettes B.P. 70239
>> F-54506 Vandoeuvre-les-Nancy, FRANCE
>>
>> e-mail : Gerald.Monard.univ-lorraine.fr
>> tel. : +33 (0)383.684.381
>> fax : +33 (0)383.684.371
>> web : http://www.monard.info
>>
>>
>> ____________________________________________________________________________
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
> _______________________________________________
> AMBER mailing list
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> http://lists.ambermd.org/mailman/listinfo/amber
>
--
____________________________________________________________________________
Prof. Gerald MONARD
SRSMC, Université de Lorraine, CNRS
Boulevard des Aiguillettes B.P. 70239
F-54506 Vandoeuvre-les-Nancy, FRANCE
e-mail : Gerald.Monard.univ-lorraine.fr
tel. : +33 (0)383.684.381
fax : +33 (0)383.684.371
web : http://www.monard.info
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Received on Thu Jul 02 2015 - 03:00:03 PDT
