Re: [AMBER] Ambertools15 installation without Amber

From: ANWESHA SARKAR <anweshasarkar47.gmail.com>
Date: Thu, 2 Jul 2015 15:15:47 +0530

yeah i did that



*Anwesha Sarkar*

*Research Scholar*

*Department of Biophysics,Molecular Biology and Bioinformatics*
*University of Calcutta*

On 2 July 2015 at 15:00, Gerald Monard <Gerald.Monard.univ-lorraine.fr>
wrote:

> Hello,
>
> Did you do 'source amber.sh' before running make test?
>
> Gerald.
>
> On 07/02/2015 11:16 AM, ANWESHA SARKAR wrote:
> > Hi Amber users,
> >
> > I have installed Ambertools 15 without Amber. On completion of the
> > installation procedure I had run the command make test. It gave me some
> > errors which are listed below:
> >
> > 1.
> >
> > ./Run.comprehensive: Program error
> > 2.
> >
> > make[3]: Target `test' not remade because of errors.
> > 3.
> >
> > make[2]: *** [test.mmpbsa] Error 2
> > 4.
> >
> > cd parmed/normag_prmtop &t' not remade because of errors.
> ./Run.parmed
> > 5.
> >
> > ./Run.parmed: Program error
> > 6.
> >
> > make[2]: *** [test.parmed] Error 1
> > 7.
> >
> > make[2]: Target `test.serial' not remade because of errors.
> > 8.
> >
> > make[3]: Target.serial' not remade because of errors.
> > 9.
> >
> > make[2]: [test.serial.sanderapi] Error 2 (ignored)
> > 10.
> >
> > Testing the C LES API gcc -I/home/anwesha/amber14/include
> > -L/home/anwesha/amber14/lib test.c -o testc -lsanderles
> >
> > (./testc && /bin/rm -f testc) || echo "Program error"
> > 11.
> >
> > Testing the C++ LES API g++
> > -I/home/anwesha/amber14/includeL/home/anwesha/amber14/lib test.cpp -o
> > testcpp -lsanderles (./testcpp && /bin/rm -f testcpp) || echo
> "Program
> > error"
> > 12.
> >
> > Testing the Python LES API (/usr/bin/python2.7 test.py) || echo
> "Program
> > error"
> >
> > I would like to know if these errors are serious errors and if yes please
> > suggest me a way out.
> >
> > Thanks in advance
> >
> > *Anwesha Sarkar*
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
> --
>
> ____________________________________________________________________________
>
> Prof. Gerald MONARD
> SRSMC, Université de Lorraine, CNRS
> Boulevard des Aiguillettes B.P. 70239
> F-54506 Vandoeuvre-les-Nancy, FRANCE
>
> e-mail : Gerald.Monard.univ-lorraine.fr
> tel. : +33 (0)383.684.381
> fax : +33 (0)383.684.371
> web : http://www.monard.info
>
>
> ____________________________________________________________________________
>
>
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> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Thu Jul 02 2015 - 03:00:03 PDT
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