Dear all,
I have an nmr structure that comes from a CYANA calculation and I want to
perform a refinement. My pdb file contains 89 residues, but the first two
are missing as they are invisible to the technique. Therefore, my cyana pdb
file starts up from residue 3 on until res 89.
I have successfully changed the atom names according to amber nomenclature.
However, when it tries to map atoms using makeDIS_RES it gives some errors
as ambpdb generates a pdb file that ranges from residue 1 to residue 87. Is
there anyway to tell ambpdb to start up on residue 3? I cannot edit the
pdbfile as it is associated with upl and chemical shift files.
Thanks,
Miguel
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Received on Tue Apr 28 2015 - 11:00:02 PDT
