Hello Sir,
I have simulated a protein-ligand structure in gromacs, now I am want to
convert the output .pdb (protein-ligand) file into .prmtop using amber14.
Firstly I was using antechamber for this purpose but it ended with
segmentation fault. Then I tried tleap and xleap also but it also failed.
Can you help me with this conversion of .pdb file into .prmtop. Suggest me
any other software suitable for this conversion.
Best Regards,
*Neha*
Research Scholar,
Centre for Computational Biology and Bioinformatics,
School of Life Sciences,
Central University of Himachal Pradesh,
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Received on Mon Apr 20 2015 - 04:00:03 PDT
