Dear Amber users,
I am following the antechamber tutorial 4b for creating topology and
co-ordinate files for a complex. After creating .prmtop and .inpcrd
file for the organic molecule using R.E.D server created .mol2 file, I
tried to complex the organic molecule with the protein. But, it was
showing the error that the molecule is an unknown residue and atoms
were not in its residue template. An archive file of the operation is
attached with the mail. Please suggest what may be the problem causing
these errors and how to counter them.
Thanking you,
Swithin Hanosh
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Received on Sat Mar 28 2015 - 05:30:04 PDT
