And, from within python, `import sys`, then `print sys.path` shows that
lib-dynload path (among others)/
On 2/15/15 2:53 PM, Novosielski, Ryan wrote:
> Sounds like you need to install the Python datetime module. Am I missing something?
>
> ____ *Note: UMDNJ is now Rutgers-Biomedical and Health Sciences*
> || \\UTGERS |---------------------*O*---------------------
> ||_// Biomedical | Ryan Novosielski - Senior Technologist
> || \\ and Health | novosirj.rutgers.edu<mailto:novosirj.rutgers.edu>- 973/972.0922 (2x0922)
> || \\ Sciences | OIRT/High Perf & Res Comp - MSB C630, Newark
> `'
>
> On Feb 15, 2015, at 14:05, Robert Wohlhueter <bobwohlhueter.earthlink.net<mailto:bobwohlhueter.earthlink.net>> wrote:
>
> [With Ubuntu 14.04 running on AMD64-bit machine, with Python2.7.5 installed]
>
> Folowing http://jswails.wikidot.com/installing-amber14-and-ambertools14
> instructions for building serial AmberTools14 + Amber14 --i.e `configure
> gnu`, then `make install` -- the configure phase seems to be successful,
> but the make phase, after a whole lot of productive compilation work,
> reports the following error:
>
> gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DHASGZ
> -DHASBZ2 -o UnitCell UnitCell.o
> /usr/local/lib/amber14/lib/libXtal.a -lm
> mv AddToBox ChBox PropPDB UnitCell /usr/local/lib/amber14/bin
> make[2]: Leaving directory
> `/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src/xtalutil/CPrograms'
> #(cd xtalutil/Phenix/ && make no )
> (cd parmed && make install)
> make[2]: Entering directory
> `/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src/parmed'
> ./setup.sh /usr/local/lib/amber14/bin /usr/bin/python2.7
> Traceback (most recent call last):
> File "<string>", line 1, in <module>
> File "chemistry/amber/readparm.py", line 25, in <module>
> from chemistry.amber.amberformat import AmberFormat
> File "chemistry/amber/amberformat.py", line 13, in <module>
> import datetime
> ImportError: No module named datetime
> make[2]: *** [install] Error 1
> make[2]: Leaving directory
> `/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src/parmed'
> make[1]: *** [serial] Error 2
> make[1]: Leaving directory
> `/mnt/sata4_1tb/usr/local/lib/amber14/AmberTools/src'
> make: *** [install] Error 2
> bobw.winter: ...lib/amber14 [80]>
>
> Apparently the error stems from some deficiency in my Python
> installation. But re-installation of Python 2.7.5 via Synaptic does not
> fix the problem. And I haven't a clue how to track down the problem.
>
> Anyone have suggestions?
>
> Thanks,
>
> Bob Wohlhueter
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org<mailto:AMBER.ambermd.org>
> http://lists.ambermd.org/mailman/listinfo/amber
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Feb 15 2015 - 13:00:03 PST
