Re: [AMBER] help on the AMBER Tutorial B0

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Thu, 18 Dec 2014 09:40:14 -0700

Hi,

The variable you want is "gamma_ln", not "gamma_in" (note the 'l'
instead of 'i').

-Dan

On Thu, Dec 18, 2014 at 9:37 AM, Dabing Chen <dabing.c.gmail.com> wrote:
> Hi All:
> Sorry to bother you with this silly question, but I am fresh to
> Amber, please bear with me.
>
> I just finished the first step, and was doing the second sander
> command (heating), then I got this:
>
> bash-4.1$ sander -O -i 02_Heat.in -o 02_Heat.out -p prmtop -c 01_Min.rst -r
> 02_Heat.rst -x 02_Heat.mdcrd -inf 02_Heat.mdinfo
> Cannot match namelist object name gamma_in
> namelist read: misplaced = sign
> Cannot match namelist object name .0
> Segmentation fault
>
> I tried many times, but nothing is helping.
> Thanks a lot in advance.
>
> Dabing
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber



-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Thu Dec 18 2014 - 09:00:03 PST
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