On Tue, Dec 09, 2014, ROOPALI VERMA wrote:
>
> but i have used same leaprc file earlier with other protein and it created
> the .prmtop and inpcrd file.
It seems unlikely that this problem is caused by changing only the nature of
the protein, and nothing else.
Did you try using "source oldff/leaprc.ff96"? What happened?
>
> recently i have installed the amber12tools and amber12 in my ubuntu system
> it runs the sander module but wont run the tleap module.
We would need more information to be of any help. Note that you should either
use AmberTools13 + Amber12, or see Jason's wiki for info on how to combine
AmberTools14 with Amber12:
http://jswails.wikidot.com/installing-ambertools-14-and-older-amber
...hope this helps....dac
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Received on Tue Dec 09 2014 - 04:30:04 PST
