Hi,
I think you are using dock6 for docking not Amber. According to your message it seems that you didn't properly set up the path to "flex_drive.tbl" into your input file. It should be something like: /your_dock6_path/parameters/flex_drive.tbl
Best,
Aldo =======================================
Aldo Segura-Cabrera
Postdoctoral Fellow
Division of Experimental Hematology and Cancer BiologyCancer and Blood Diseases Institute
Cincinnati Children's Hospital Medical Center
3333 Burnet Ave, MLC 7013, Cincinnati OH 45229
=========================================
De: "Wong, Sook (NIH/NCATS) [V]" <sook.wong.nih.gov>
Para: "amber.ambermd.org" <amber.ambermd.org>
Enviado: Jueves, 4 de diciembre, 2014 12:28:28
Asunto: [AMBER] Docking with Dock6
Hi all,
I am trying to dock ligand onto receptor with Dock6 using Amber14 but encounter the following:
ERROR get_flex_search: Positions field doesn't follow Id in ../00.files/flex_drive.tbl
Any idea what is this about? Is it an issue related to initial ligand.mol2?
Appreciate your advice.
-Sook Wong
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Received on Thu Dec 04 2014 - 10:30:02 PST
