Minimization does not have a time associated. Nstlim is not used for it,
nor is dt. Have you worked through the tutorials? They can be very helpful.
On Nov 30, 2014 8:38 AM, "pradeep pant" <pradeep.pant25.gmail.com> wrote:
> Hi all,
> Is the script below is fine for running a simple 100ps long minimization.
>
> &cntrl
>   imin   = 1,
>   maxcyc = 500,
>   dt     = 0.02,
>   nstlim = 5000,
>   ncyc   = 250,
>   ntb    = 0,
>   igb    = 0,
>   cut    = 12
>  /
>
> Any help would be highly appreciated.
>
> Regards,
> Pradeep
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Nov 30 2014 - 06:00:05 PST