Re: [AMBER] amber error about protein containing heme

From: David A Case <case.biomaps.rutgers.edu>
Date: Sat, 22 Nov 2014 07:35:03 -0500

On Sat, Nov 22, 2014, Fatemeh Sadat Alavi wrote:

> when I tried to save to topology file and coordinate file, following message
> appears. It didn't create any topology file. what will be the possible
> reason for this error.I recently searched the previous messages in the
> mailing list to look for solution but I found no luck.

If you Google on 'Amber "does not have a type"', you can find tons of hits.

The atom and residue names in your input pdb file have to match those in the
library file (in your case, the heme_all.in file).

....dac


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Received on Sat Nov 22 2014 - 05:00:02 PST
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