Re: [AMBER] amber error about protein containing heme

From: David A Case <case.biomaps.rutgers.edu>
Date: Tue, 18 Nov 2014 07:38:56 -0500

On Tue, Nov 18, 2014, Fatemeh Sadat Alavi wrote:

> I am trying to prepare Amber input file for heme group.
> but while making the input file for amber using tleap, I am getting error
> massage.

You have MS-DOS file endings in your heme.frcmod and in the hemeall.in
files. You need to use a text editor to get rid of this (or run a program
like dos2unix). (If you downloaded them from the web, try to do that in
a mode that does not add DOS line endings.)

....dac


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Received on Tue Nov 18 2014 - 05:00:03 PST
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