Hi,
There were no attachments to your email. Can you at least paste the
last 20 or so lines of the output from 'make install' so we can see
the error message (or messages)? Thanks,
-Dan
On Tue, Oct 7, 2014 at 7:45 AM, Fabian <fabian.glaser.gmail.com> wrote:
> Dear all,
>
> We are trying to compile amber for parallel use in our cluster for a while, as you can see below our trial failed, both the output and log files are attached.
>
> I will apprecciate any suggestions.
>
> Fabian
>
> Sent from my iPhone
>
> Begin forwarded message:
>
>> From: Amihai <amihai.technion.ac.il>
>> Date: 7 באוקטובר 2014 16:15:53 GMT+3
>> To: Fabian Glaser <fglaser.technion.ac.il>
>> Cc: "HPC-SUPPORT-L.LISTSERV.TECHNION.AC.IL" <HPC-SUPPORT-L.LISTSERV.TECHNION.AC.IL>
>> Subject: parallel amber installation failed
>>
>> The parallel amber installation failed. Below is the log of what was done, please send it to the support.
>>
>> cd $AMBERHOME/AmberTools/src
>> openmpi-1.5.4 was installed there as instructed by the script.
>> ./configure_openmpi gnu
>> cd $AMBERHOME
>> ./configure -mpi gnu
>> up to this stage, everything was OK.
>>
>> make install
>> failed with errors.
>>
>> Attached are the full output of the configure and make commands.
>>
>> Please forward them to the amber support.
>> --
>> Amihai Silverman
>> Computing and Information Systems Division, Technion.
>> --
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> http://lists.ambermd.org/mailman/listinfo/amber
--
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 307
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Tue Oct 07 2014 - 07:30:03 PDT
