Dear all,
We are trying to compile amber for parallel use in our cluster for a while, as you can see below our trial failed, both the output and log files are attached.
I will apprecciate any suggestions.
Fabian
Sent from my iPhone
Begin forwarded message:
> From: Amihai <amihai.technion.ac.il>
> Date: 7 באוקטובר 2014 16:15:53 GMT+3
> To: Fabian Glaser <fglaser.technion.ac.il>
> Cc: "HPC-SUPPORT-L.LISTSERV.TECHNION.AC.IL" <HPC-SUPPORT-L.LISTSERV.TECHNION.AC.IL>
> Subject: parallel amber installation failed
>
> The parallel amber installation failed. Below is the log of what was done, please send it to the support.
>
> cd $AMBERHOME/AmberTools/src
> openmpi-1.5.4 was installed there as instructed by the script.
> ./configure_openmpi gnu
> cd $AMBERHOME
> ./configure -mpi gnu
> up to this stage, everything was OK.
>
> make install
> failed with errors.
>
> Attached are the full output of the configure and make commands.
>
> Please forward them to the amber support.
> --
> Amihai Silverman
> Computing and Information Systems Division, Technion.
> --
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Received on Tue Oct 07 2014 - 07:00:02 PDT
