[AMBER] Antechamber Error: Cannot open file CORR_NAME_TYPE.DAT, exit

From: Andy Tsai <andytsai14.gmail.com>
Date: Mon, 11 Aug 2014 16:41:42 -0700


Platform: MacOS 10.9 Mavericks on a Macbook Pro

I have been using AmberTools 14 for the past month fine. Today when I attempted to use antechamber I got the following error:

\ek\e\[dhcp-v031-230 : 002.ante.tleap] andytsai 3.2$ antechamber -i gaurav.mol2 -fi mol2 -o gaurav.ante.pdb -fo pdb
Cannot open file CORR_NAME_TYPE.DAT, exit
\ek\e\[dhcp-v031-230 : 002.ante.tleap] andytsai 3.2$

I have uninstalled and reinstalled Ambertools14. These are being installed in

I tried to permissions,

\ek\e\[dhcp-v031-230 : ~] andytsai 3.2$ sudo chmod -R 777 ~/amber14

Thinking maybe it was a permissions error from what I read from previous users on the list serve. I have restarted and reinstalled several times.

At first I thought it was because I installed Dock6, and that has antechamber packaged with it, and maybe it was a conflict, so I uninstalled Dock6, and tried to reinstall AmberTools14 but it still failed.

I am open and appreciative to any suggestions anyone has.

Best Regards,

Andy Tsai
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Received on Mon Aug 11 2014 - 17:00:02 PDT
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