On Thu, 2014-05-22 at 03:53 -0700, Sajda Ashraf wrote:
> Hi,
> when i run antechamber for ligand preparation i faced this problem
>
> Error: cannot run "/usr/local/amber11/bin/sqm -O -i sqm.in -o sqm.out" of bcc() in charge.c properly, exit
> is any knows about this problem?
Indeed, this problem has been reported many times before.
Try Googling the full error message -- it will bring you to past threads
on this mailing list where the problem has been discussed.
Also, if you continue to experience problems you should upgrade to the
latest version of AmberTools to see if your problems may have been
fixed.
Good luck,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Thu May 22 2014 - 05:00:02 PDT
