Hi Jason,
Actually all updates were applied. We said "yes" here and after applying
all updates we did "make install" to compile in serial and parallel. Here
we pasted this information because Daniel Roe asked that whether all the 21
updates were applied or not.
---------------------------------------------------------------------
Indrajit Deb
Kolkata, India.
Mob: +919239202278
On Wed, May 21, 2014 at 9:10 PM, Jason Swails <jason.swails.gmail.com>wrote:
> On Wed, 2014-05-21 at 20:26 +0530, Indrajit Deb wrote:
> > 1. *Were all patches applied *
> >
> > The output of ./configure is as follows:
> >
> >
> -------------------------------------------------------------------------------------------------------------
> > Checking for updates...
> > Checking for available patches online. This may take a few seconds...
> >
> > Available AmberTools 13 patches:
> >
> > update.1, update.2, update.3, update.4, update.5, update.6, update.7,
> > update.8, update.9, update.10,
> > update.11, update.12, update.13, update.14, update.15, update.16,
> > update.17, update.18, update.19, update.20,
> > update.21, update.22, update.23, update.24
> >
> > Available Amber 12 patches:
> >
> > bugfix.1, bugfix.2, bugfix.3, bugfix.4, bugfix.5, bugfix.6, bugfix.7,
> > bugfix.8, bugfix.9.bz2_, bugfix.10,
> > bugfix.11, bugfix.12, bugfix.13, bugfix.14, bugfix.15, bugfix.16,
> > bugfix.17, bugfix.18.bz2, bugfix.19, bugfix.20,
> > bugfix.21
> > There are patches available. Do you want to apply them now? [y/n]
> > (Recommended Y)
>
> No updates appear to be applied. Please recompile Amber (in both serial
> and parallel) saying "yes" to the available patches to make sure you are
> using a fully up-to-date version of Amber.
>
> --
> Jason M. Swails
> BioMaPS,
> Rutgers University
> Postdoctoral Researcher
>
>
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Wed May 21 2014 - 11:30:02 PDT
