Yes i am aware of it. I wanted to work on Amber Tools 13 and i was unable
to follow it, so i started with Amber8. The tutorial for Amber Tools 13 is
not given in the Amber website. I wanted to know if i can get a tutorial
for Amber Tools 13, because it is so different from Amber 12 tutorial given
in the homepage.
On Sat, Jan 25, 2014 at 8:01 PM, David A Case <case.biomaps.rutgers.edu>wrote:
> On Sat, Jan 25, 2014, esther nehu wrote:
>
> > I was following an Amber8 tutorial. I have downloaded the nuc.in and on
> > running nucgen the following appears:
> >
> > unknown flag: nuc.out
> > usage: nucgen [-O] -i ngin -o ngout -d ngdat -p pdbout.
> >
> > I dont understand where ive gone wrong. Can you tell me how to proceed?
>
> Wow...Amber 8 is 10 years old, and the nucgen program was replaced many
> releases ago. However, we can probably help *if* you give details
> about exactly what you typed in running the nucgen program (what were the
> command-line arguments)? Just saying "on running nucgen" does not provide
> enough information.
>
> ...dac
>
>
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Received on Tue Jan 28 2014 - 04:30:02 PST
