Re: [AMBER] How do I know if QM is working in sander.MPI?

From: Ross Walker <ross.rosswalker.co.uk>
Date: Wed, 20 Nov 2013 19:33:14 -0800

You need to add ifqnt=1 in the cntrl namelist to enable QM/MM - otherwise
the code will just ignore the qmmm namelist in your input.


All the best
Ross

On 11/20/13 7:23 PM, "yunshi11 ." <yunshi09.gmail.com> wrote:

>Hi everyone,
>
>I tried to do minimization with a residue treated by QM, and my input
>parameters:
>
>QM initial min
> &cntrl
> imin=1, maxcyc=400, ncyc=200,
> cut=10, ntb=1, igb=0,
> ntc=2, ntf=2
> /
> &qmmm
> qmmask=':388',
> qmcharge=-1.0592,
> qmtheory=DFTB,
> qmshake=1,
> qm_ewald=1, qm_pme=1
> /
>
>But I cannot tell any difference from the .out file, so I wonder how do I
>know if sander.MPI does not ignore the entire &qmmm namelist?
>
>Best,
>Yun
>_______________________________________________
>AMBER mailing list
>AMBER.ambermd.org
>http://lists.ambermd.org/mailman/listinfo/amber



_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Nov 20 2013 - 20:00:02 PST
Custom Search