Re: [AMBER] Sander error (AmberTools 13 & Amber10)

From: Daniel Roe <>
Date: Thu, 31 Oct 2013 09:38:57 -0600


On Thu, Oct 31, 2013 at 9:24 AM, Concha, Monica
<> wrote:
> The output is as follows:
> /home/glenn/amber10_distribution/amber10/bin/sander: error while loading shared libraries: cannot open shared object file: No such file or directory

This kind of error is usually related to your system's environment not
being set up properly, such as your LD_LIBRARY_PATH not containing the
'lib' directory of whatever compiler you used to compile sander. What
compiler did you use to make sander?


Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
(801) 587-9652
(801) 585-6208 (Fax)
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Received on Thu Oct 31 2013 - 09:00:03 PDT
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