[AMBER] Sander error (AmberTools 13 & Amber10)

From: Concha, Monica <Monica.Concha.ARS.USDA.GOV>
Date: Thu, 31 Oct 2013 15:24:39 +0000

Good Morning,

Why sander is not working!
I just installed AmberTools13
/home/mconcha/amber12/amberTools 13

This is how I set up my environment:
export AMBERHOME=/home/mconcha/amber12
export PATH=$AMBERHOME/bin:/home/mconcha/amber12/bin:$PATH

and Amber10 is in /home/glenn/amber10_distribution/amber10/bin/sander

I'm using this command:
/home/glenn/amber10_distribution/amber10/bin/sander -O -i polyAT_vac.in -o polyAT_vac.out -c polyAT_vac.inpcrd -p polyAT_vac.prmtop -r polyAT_vac.rst

The output is as follows:
/home/glenn/amber10_distribution/amber10/bin/sander: error while loading shared libraries: libfortran.so: cannot open shared object file: No such file or directory

What am I doing wrong here?


Monica C. Concha
Physical Science Technician
Cotton Structure and Quality Research
Southern Regional Research Center
1100 Robert E. Lee Blvd.
New Orleans, LA 70124
phone: 504-286-4252

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Received on Thu Oct 31 2013 - 08:30:02 PDT
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