On Tue, Oct 29, 2013 at 4:09 PM, Concha, Monica
<Monica.Concha.ars.usda.gov>wrote:
> Hi,
>
> I recently installed AmberTools13 for the first time. However,
> when I try to
> run sander I find that it is not in the amber12/bin folder and I get the
> error message that amber12/bin/sander does not exist. Does anyone know
> what am I doing wrong?
>
sander is part of Amber 12. If you do not have an Amber 12 license then
sander 12 will not be built.
As you mentioned, you do have Amber 10, so you will need to use sander from
/home/glenn/amber10_distribution/amber10/bin instead.
HTH,
Jason
--
Jason M. Swails
BioMaPS,
Rutgers University
Postdoctoral Researcher
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Received on Tue Oct 29 2013 - 13:30:04 PDT
