Re: [AMBER] NAB : Orienting a molecule

From: case <>
Date: Sat, 5 Oct 2013 09:19:57 -0400

On Sat, Oct 05, 2013, HIMANSHU JOSHI wrote:
> I am trying to build a model with Nucleic acid where I would
> like to align the molecule (say 12 mer dna) to a particular line .

The simplest way to do this is to use the setframe() and alignframe()
functions in NAB. See Section 17.2 of the AmberTools manual.

...good luck....dac

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Received on Sat Oct 05 2013 - 06:30:03 PDT
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