Dear Jason,
I will upgrade to AmberTools 13. Thank you very much for your suggestion.
Best,
Xioling
> From: jason.swails.gmail.com
> Date: Sun, 25 Aug 2013 23:32:24 -0400
> To: amber.ambermd.org
> Subject: Re: [AMBER] MMPBSA: AttributeError: 'list' object has no attribute 'stdev'
>
> Upgrade to AmberTools 13 with all of the updates. I believe this issue was previously reported and fixed in that version.
>
> If not, please set debug_printlevel to 2 in the _MMPBSA_info file and run
>
> MMPBSA.py -rewrite-output
>
> So I can get a trace back with a location of the error.
>
> (Note you can use the above command with AmberTools 13 to avoid recalculating the entropies).
>
> Good luck,
> Jason
>
>
> On Aug 25, 2013, at 10:23 PM, Xioling Chuang <xioling_c.hotmail.com> wrote:
>
> > Dear All,
> >
> > I am using AmberTools12 and Amber 12 to calculate nmode analysis. I got an error message as
> >
> > AttributeError: 'list' object has no attribute 'stdev'
> > Error occured on rank 0.
> > Exiting. All files have been retained.
> >
> > I have found the same error message in amber mailing list, but no answer. Could you please suggest me to solve this problem?
> > Thank you very much in advance.
> >
> > Best,
> > Xioling
> >
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Received on Mon Aug 26 2013 - 01:00:03 PDT
