Thanks for your help. That was a quick fix!
-HAB
-----Original Message-----
>From: Jason Swails <jason.swails.gmail.com>
>Sent: Jul 23, 2013 2:58 PM
>To: Hunter Brown <bassoongoon.earthlink.net>, AMBER Mailing List <amber.ambermd.org>
>Subject: Re: [AMBER] ptraj, outprefix not giving a stripped prmtop
>
>
>
>On Jul 23, 2013, at 4:40 PM, Hunter Brown <bassoongoon.earthlink.net> wrote:
>
>> I have included here my ptraj script:
>>
>> trajin MD_prod1.mdcrd 1 2500 5
>> trajin MD_prod2.mdcrd 1 2500 5
>> trajin MD_prod3.mdcrd 1 2500 5
>> trajin MD_prod4.mdcrd 1 2500 5
>> strip :WAT outprefix strip
>> center origin :MET
>> image origin center familiar
>> trajout 2foldposionized.mdcrd
>> go
>>
>>
>> It produces the file 2foldposionized.mdcrd, but fails to produce the strip.prmtop file.
>>
>> I do not think that my usage is incorrect, but it might be.
>>
>>
>> Is there something wrong with my script?
>
>Only cpptraj recognizes this keyword.
>
>HTH,
>Jason
>
>>
>>
>> Thanks in advance,
>>
>> -Hunter
>>
>> Hunter Brown
>> Bassoonist, Contrabassoonist, Composer, Chemical Engineering Major
>> University of New Mexico
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>
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Hunter Brown
Bassoonist, Contrabassoonist, Composer, Chemical Engineering Major
University of New Mexico
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Received on Tue Jul 23 2013 - 14:30:03 PDT
