Re: [AMBER] speed of amber12

From: Jason Swails <jason.swails.gmail.com>
Date: Mon, 15 Jul 2013 16:19:35 -0400

On Mon, Jul 15, 2013 at 2:40 PM, Jorgen Simonsen <jorgen589.gmail.com>wrote:

> hi guys,
>
> I recompiled everything with new intel compilers ( mpiicc, mpiifort ) using
> only intel libraries but now I get the following problem when running the
> make test.parallel:
>
>
> /etc/tmi.conf: No such file or directory
> /etc/tmi.conf: No such file or directory
> /etc/tmi.conf: No such file or directory
> /etc/tmi.conf: No such file or directory
>
> [3] MPI startup(): tmi fabric is not available and fallback fabric is not
> enabled
> [0] MPI startup(): tmi fabric is not available and fallback fabric is not
> enabled
> [1] MPI startup(): tmi fabric is not available and fallback fabric is not
> enabled
> [2] MPI startup(): tmi fabric is not available and fallback fabric is not
> enabled
>
>
> I use this mpirun for the run: intel/impi/4.1.0.030/intel64/bin/mpirun
>
> Any advise how to fix this thanks?
>

Run the tests on the compute nodes. Frequently enough, MPI programs do not
work on the head/login nodes of clusters.

Good luck,
Jason

-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Mon Jul 15 2013 - 13:30:02 PDT
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