On Sat, Jul 06, 2013, Su, Shiquan wrote:
>
> However, when I look at the following libtool link line carefully, I see
> something strange, the paths after -L all end with /amber12, which don't
> exist in the system at all! For example:
> -L/sw/kfs/amber/12/centos6.2_gnu4.4.6_sandybridge/amber12/AmberTools/src/mtkpp/src/Molecule/amber12
I agree that this is likely to be the error, but it's unclear how it happened.
Is there any chance of operator error, i.e. can you try this:
cd $AMBERHOME (and double check that AMBERHOME is set correctly)
make uninstall
./configure gnu
make install
Just to see if you get the same error?
Of course, as Jason already pointed out, -nomtkpp should also help, unless you
know you are going to need the mtkpp capabilities. You might also see
what "libtool -V" reports, although I doubt that will help us very much...
...dac
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Received on Fri Jul 05 2013 - 19:30:02 PDT
