Re: [AMBER] problem in cpptraj installation

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Sun, 5 May 2013 10:26:19 -0600

Hi,

This is a very strange error. If configure goes well and libbz2 is
found, that is not consistent with the error message:

*/usr/bin/ld: cannot find -lbz2*

On Sun, May 5, 2013 at 10:07 AM, Kshatresh Dutta Dubey
<kshatresh.gmail.com> wrote:
> bzip2-devel is also installed. Even I had commented libbz2 in config.h for
> cpptraj configuration but every time I am getting same error. However, this

In order to manually disable bzip2 support, setting BZLIB in config.h
to an empty string, i.e.

BZLIB=

is not enough. You have to also remove the reference to '-DHASBZ2'
from the CFLAGS variable.

> problem has been resolved using parallel version and cpptraj has been
> installed but it is still showing error in serial version.

So just to be clear, bzip2 support works with the OpenMP version but
not the serial version? That doesn't make sense to me. Maybe send me
off-list your config file and a compile log if you have it?

-Dan

-- 
-------------------------
Daniel R. Roe, PhD
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
(801) 585-9119 (Fax)
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Received on Sun May 05 2013 - 09:30:25 PDT
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