Hi All,
I was using below mentioned lines to calculate the distance between two
atoms from two different simulations.
parm complex1.prmtop
parm complex2.prmtop
trajin ../nowat12ns.mdcrd parm complex1.prmtop
trajin PfActin_prime/nowat12ns_atp.mdcrd parm complex2.prmtop
distance Pclamp :16.CA :158.CA out Pclamp_PfNoLat.dat
Can anyone correct me how to modify last distance line so that i can get
the distance measurement between two atoms from two the trajectories.
Thanks,
HM
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Received on Fri Feb 01 2013 - 07:30:03 PST
