I have one further query in the same line. I am interested in comparing the
two systems in terms of their 2drms plot. But by default one plot
(generated by .gnu output file) ranges between -2 to +2 and another system
ranges between -3 to +3. Due to which It becomes difficult to compare it at
first look.
Again this is related to gnuplot but it would be nice if I can get help how
can i change colorscale range.
THanks,
HM
On Thu, Jan 31, 2013 at 6:32 PM, HM <scienceamber.gmail.com> wrote:
> Thanks Thomas, Igor. And thanks Daniel, that helps a lot.
>
> On Wed, Jan 30, 2013 at 7:03 PM, Daniel Roe <daniel.r.roe.gmail.com>wrote:
>
>> Hi,
>>
>> I use the attached script to quickly convert gnuplot files output from
>> cpptraj to JPEG files. It just modifies the gnuplot commands so that
>> it writes to a jpg.
>>
>> Usage: Gnu2jpg.sh <inputfile> [rect] [square] [size <x,y>]
>>
>> Example: Given the gnuplot output dssp.gnu,
>>
>> ./Gnu2jpg.sh dssp.gnu
>>
>> outputs dssp.jpg.
>>
>> -Dan
>>
>> On Wed, Jan 30, 2013 at 7:13 AM, HM <scienceamber.gmail.com> wrote:
>> > Hi All,
>> > I used cpptraj to generate plot for secondary structure (in .gnu form).
>> Now
>> > I want to save this as image. But I do not see any option to save it,
>> there
>> > is only one option i.e. copy to clipboard. When I try to copy it and
>> paste
>> > in OpenOffice it does not work. I know it is not related to AMBER but
>> guys
>> > help me.
>> >
>> > Thanks,
>> > Hirdesh
>> > _______________________________________________
>> > AMBER mailing list
>> > AMBER.ambermd.org
>> > http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>>
>> --
>> -------------------------
>> Daniel R. Roe, PhD
>> Department of Medicinal Chemistry
>> University of Utah
>> 30 South 2000 East, Room 201
>> Salt Lake City, UT 84112-5820
>> http://home.chpc.utah.edu/~cheatham/
>> (801) 587-9652
>> (801) 585-9119 (Fax)
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>>
>
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Received on Thu Jan 31 2013 - 10:00:03 PST
