you could add it as a restraint (nmropt=1).
On Mon, Jan 21, 2013 at 9:27 AM, Negar Ashari Astani
<negarastani.gmail.com>wrote:
> Hello everyone,
>
> I had a question on dihedrals! Is there any way for defining a dihedral
> energy for four non-serial atoms? (assuming that I have already defined
> different atom types not to confuse with other real dihedrals).
> These atoms are not in an improper manner! It's just that there are several
> other atoms between them!
>
> Many thanks,
> Negar
>
> --
> Negar Ashari Astani
> PhD student
> Laboratory of Computational Biochemistry and Chemistry (LCBC)
> Swiss Federal Institute of Technology (EPFL)
> BCH 4118 (Bat. BCH)
> CH-1015 Lausanne
> Phone: +41 (0)21 693 03 26
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Received on Mon Jan 21 2013 - 07:00:02 PST
