Hi everyone,
Many moons ago, I posted a script on how to install Amber in Ubuntu 10.
Well, against my better judgement, I upgraded Ubuntu last week to 12.04. I noticed my AmberTools no longer "worked". I followed Jason Swail's wiki on installing ambertools12 because I figured it was time to upgrade anyway, and that didn't work either. I also tried doing this from the Gnome desktop interface on 12.04, just in case it was a compatibility issue with Unity.
When I installed AmberTools 12, the tests seem to run successfully, and I was thinking it was somehow my environment variables, even though I followed Jason Swail's instructions. I am specifically interested in getting nab to work, and it wouldn't even work when I copied my nuc.nab file directly into the bin directory where nab lives.
I noticed gromacs stopped working as well, although I realize this isn't exactly the place to complain about that.
Has anyone shared this experience? How do I go about fixing this?
Many thanks in advance,
-Dave Dubins
------------------------------------------------
David Dubins, Ph.D., B.Eng.
Instructor and Laboratory Coordinator
Leslie Dan Faculty of Pharmacy
University of Toronto
Room PB 802
144 College Street Toronto, Ontario M5S 3M2
Phone: 416-946-5303
Fax: 416-978-8511
d.dubins.utoronto.ca
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Received on Mon Jan 14 2013 - 15:00:02 PST
