Why not try the latest Ambertools? It's free ...
Ray
On Thu, Dec 6, 2012 at 10:32 PM, Anogna <anognal.gmail.com> wrote:
> Dear Amber Users,
>
>
> I have been running some tests with the MM-PBSA suite of perl scripts
> using example files provided in tutorial using Amber10 tools.
>
> But i am coming across error message as follows when i tried to run
>
> /mm_pbsa.pl extract_coords.mmpbsa > extract_coords.log &
>
> Error as follows
>
> * "my" variable $delphiout masks earlier declaration in same scope at
> /applications/smp/amber/10/intelmpi-mkl/src/mm_pbsa/mm_pbsa_calceneent.pmline
> 414.
> *
> *syntax error at /applications/smp/amber/10/intelmpi-mkl/src/mm_pbsa/
> mm_pbsa_calceneent.pm line 365, near ">"*
> *syntax error at /applications/smp/amber/10/intelmpi-mkl/src/mm_pbsa/
> mm_pbsa_calceneent.pm line 365, near "})"*
> *Compilation failed in require at
> /applications/smp/amber/10/intelmpi-mkl/exe/mm_pbsa.pl line 28.*
> *BEGIN failed--compilation aborted at
> /applications/smp/amber/10/intelmpi-mkl/exe/mm_pbsa.pl line 28.*
>
> what would be reason for this kind of error.
> Can anyone help me with this plz.
>
> with regards,
> Anogna
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Received on Fri Dec 07 2012 - 11:00:03 PST
