Dear Amber Users,
I have been running some tests with the MM-PBSA suite of perl scripts
using example files provided in tutorial using Amber10 tools.
But i am coming across error message as follows when i tried to run
/mm_pbsa.pl extract_coords.mmpbsa > extract_coords.log &
Error as follows
* "my" variable $delphiout masks earlier declaration in same scope at
/applications/smp/amber/10/intelmpi-mkl/src/mm_pbsa/mm_pbsa_calceneent.pmline
414.
*
*syntax error at /applications/smp/amber/10/intelmpi-mkl/src/mm_pbsa/
mm_pbsa_calceneent.pm line 365, near ">"*
*syntax error at /applications/smp/amber/10/intelmpi-mkl/src/mm_pbsa/
mm_pbsa_calceneent.pm line 365, near "})"*
*Compilation failed in require at
/applications/smp/amber/10/intelmpi-mkl/exe/mm_pbsa.pl line 28.*
*BEGIN failed--compilation aborted at
/applications/smp/amber/10/intelmpi-mkl/exe/mm_pbsa.pl line 28.*
what would be reason for this kind of error.
Can anyone help me with this plz.
with regards,
Anogna
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Received on Thu Dec 06 2012 - 23:00:03 PST
