Hi Jason,
I did what you suggested and now it works. Thank you so much!
Regards,
Jia
On Thu, Nov 8, 2012 at 7:27 AM, Jason Swails <jason.swails.gmail.com> wrote:
> Hello,
>
> MTK++ (and bundled programs, like MCPB) are part of AmberTools. The
> scripts you are referring to were inadvertently omitted from the release
> tarball to my knowledge.
>
> They were not omitted from AmberTools 1.5, though, and they appear not to
> have been updated since AmberTools 1.5. Therefore, while this is
> addressed, you can download that tarball (under the Downloads section on
> the Amber website) and get the scripts from there as a workaround.
>
> Note, please do NOT compile and use AmberTools 1.5 instead of AmberTools
> 12, just use the missing scripts from that tarball.
>
> HTH,
> Jason
>
> On Thu, Nov 8, 2012 at 2:17 AM, Jia Xu <xujia.ruc.gmail.com> wrote:
>
> > Dear Amber users,
> > I have a question about the installation of MTK++ and MCPB in
> > ambertools. The ambertool12 was compiled on a ubuntu 12.04 64bit platform
> > by GNU suite. After the installation, the genMetalFF.sh and getCharges.sh
> > do not exist (I searched all .sh files in $AMBERHOME).
> > Moreover, there are no $AMBERHOME/AmerTools/examples/mtkpp as
> described
> > in bugfix 25. In my example folder, there are only 4 folders (nab
> peptide
> > resp_charge_fit suppose).
> > The Ambertools12 is up to date. The log file of mtkpp configure and
> > installation were attached.
> > Could anyone tell me why? Or does this mtkpp package belong to
> amber,
> > not ambertools? Any help will be greatly appreciated!
> > Regards,
> > Jia
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Candidate
> 352-392-4032
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> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Thu Nov 08 2012 - 10:00:02 PST
