Hello,
MTK++ (and bundled programs, like MCPB) are part of AmberTools. The
scripts you are referring to were inadvertently omitted from the release
tarball to my knowledge.
They were not omitted from AmberTools 1.5, though, and they appear not to
have been updated since AmberTools 1.5. Therefore, while this is
addressed, you can download that tarball (under the Downloads section on
the Amber website) and get the scripts from there as a workaround.
Note, please do NOT compile and use AmberTools 1.5 instead of AmberTools
12, just use the missing scripts from that tarball.
HTH,
Jason
On Thu, Nov 8, 2012 at 2:17 AM, Jia Xu <xujia.ruc.gmail.com> wrote:
> Dear Amber users,
> I have a question about the installation of MTK++ and MCPB in
> ambertools. The ambertool12 was compiled on a ubuntu 12.04 64bit platform
> by GNU suite. After the installation, the genMetalFF.sh and getCharges.sh
> do not exist (I searched all .sh files in $AMBERHOME).
> Moreover, there are no $AMBERHOME/AmerTools/examples/mtkpp as described
> in bugfix 25. In my example folder, there are only 4 folders (nab peptide
> resp_charge_fit suppose).
> The Ambertools12 is up to date. The log file of mtkpp configure and
> installation were attached.
> Could anyone tell me why? Or does this mtkpp package belong to amber,
> not ambertools? Any help will be greatly appreciated!
> Regards,
> Jia
>
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>
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Thu Nov 08 2012 - 05:30:03 PST
