Re: [AMBER] Error in minimization

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Tue, 5 Jun 2012 07:18:32 -0400

Hi,

Try replacing the forward slash with '&end' and see if that works.

-Dan

On Tue, Jun 5, 2012 at 3:37 AM, Asma Abro 28-FBAS/MSBI/F09
<asma.msbi28.iiu.edu.pk> wrote:
> Yeah, it's not the problem.
> I am posting the file here:
>
> Mini input
>
> &cntrl
>  imin=1, maxcyc = 200, ncyc = 50,
>  ntb = 0, igb = 1, cut = 10,
>  ntpr = 100
>  /
>
> Regards
>
> On Tue, Jun 5, 2012 at 12:26 PM, Ben Roberts <ben.roberts.geek.nz> wrote:
>
>> Hi Asma,
>>
>> (answer below)
>>
>> On 5/06/2012, at 6:24 PM, Asma Abro 28-FBAS/MSBI/F09 wrote:
>>
>> > Hi all,
>> >
>> > When I am trying to minimize my pdb structure, I am getting the error:
>> >
>> > At line 901 of file _mdread.f (unit = 5, file = 'min.in')
>> > Fortran runtime error: End of file
>> >
>> > Can anyone tell what does this mean?
>>
>> My guess is that it means your input file, which you say is called "min.in",
>> has been cut short in some way, probably because you forgot to include a
>> final line containing only a forward slash (/). If that's not the problem,
>> please post the entire min.in to this list so we can better advise you.
>>
>> Regards,
>> Ben
>>
>>
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-- 
-------------------------
Daniel R. Roe, PhD
Lab Specialist
Department of Medicinal Chemistry
University of Utah
30 South 2000 East, Room 201
Salt Lake City, UT 84112-5820
http://home.chpc.utah.edu/~cheatham/
(801) 587-9652
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Received on Tue Jun 05 2012 - 04:30:02 PDT
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