Make sure you apply all bug fixes first (for both Amber 11 AND AmberTools
1.5). This error would occur if you did not patch both (and did not run
AT15_Amber11.py).
HTH,
Jason
On Tue, Jun 5, 2012 at 3:46 AM, arun kumar <arunjones.kumar89.gmail.com>wrote:
> Dear all
>
> i am trying to install amber 11 with ambertools 1.5 in cent OS 6.2 .
> i completed installing ambertools but during amber 11 installation i
> encountered the fallowing error
>
> make[5]: Leaving directory `/usr/local/amber11/AmberTools/src/netcdf/src'
> make[4]: Leaving directory `/usr/local/amber11/AmberTools/src/netcdf/src'
> make[3]: Leaving directory `/usr/local/amber11/AmberTools/src/netcdf/src'
> make[2]: Leaving directory `/usr/local/amber11/AmberTools/src/netcdf/src'
> cp ../../AmberTools/src/netcdf/include/*.mod .
> cp: cannot stat `../../AmberTools/src/netcdf/include/*.mod': No such file
> or directory
> make[1]: *** [netcdf.mod] Error 1
> make[1]: Leaving directory `/usr/local/amber11/src/sander'
> make: *** [serial] Error 2
> bash-4.1#
>
> can any one tell what is the problem and how to solve it.
>
>
> --
> Arun Kumar Somavarapu
> Project-JRF
> Dr. Prasanna's lab
> TMC, ACTREC
> Navi Mumbai-410210
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Tue Jun 05 2012 - 07:00:03 PDT
