Thanks. I will try that. If you find out a solution to the problem, I
would appreciate it.
Audie
On 5/20/12 9:50 PM, Jason Swails wrote:
> I will look into this in a couple weeks when I get a chance. As a temporary workaround, you can use the -nobintraj flag for configure and see if that helps.
>
> However, you won't be able to read or write netcdf files using any Amber/AmberTools program.
>
> Hth,
> Jason
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Candidate
> 352-392-4032
>
> On May 21, 2012, at 9:12 AM, Arthur Roberts<audie.uga.edu> wrote:
>
>> Hi, all.
>>
>> Thanks for the info. I appreciate your help. However, I still get the
>> following errors, when I try to install on Lion Mac OSX:
>>
>> bintraj.f90:558.18:
>>
>> call checkerror(nf90_put_var(ncid, var_id, buf(:,:),&
>> 1
>> Error: Generic function 'nf90_put_var' at (1) is not consistent with a
>> specific intrinsic interface
>> bintraj.f90:450.18:
>>
>> call checkerror(nf90_put_var(mdcrd_ncid, coord_var_id, buf(:,:),&
>> 1
>> Error: Generic function 'nf90_put_var' at (1) is not consistent with a
>> specific intrinsic interface
>> bintraj.f90:220.22:
>>
>> call checkerror(nf90_put_att(mdcrd_ncid, mdcrd_veloc_var_id,&
>> 1
>> Error: Generic function 'nf90_put_att' at (1) is not consistent with a
>> specific intrinsic interface
>> bintraj.f90:316.20:
>>
>> call checkerror(nf90_put_att(mdvel_ncid, mdvel_veloc_var_id,&
>> 1
>> Error: Generic function 'nf90_put_att' at (1) is not consistent with a
>> specific intrinsic interface
>> make[2]: *** [bintraj.o] Error 1
>> make[1]: *** [install] Error 2
>> make: *** [serial] Error 2
>>
>> Much appreciated,
>> Audie
>>
>>
>> On 5/20/12 7:52 AM, case wrote:
>>> On Sat, May 19, 2012, Arthur Roberts wrote:
>>>> However, I get the following error:
>>>>
>>>> gfortran -c -O3 -mtune=generic -ffree-form -o mbar.o _mbar.f
>>>> cpp -traditional -P -DBINTRAJ bintraj.f> _bintraj.f
>>>> gfortran -c -O3 -mtune=generic -ffree-form -o bintraj.o _bintraj.f
>>>> _bintraj.f:403.25:
>>>>
>>>> call checkerror(nf90_put_att(vel_ncid, VelocVarID,
>>>> "scale_factor",&
>>>> 1
>>>> Error: Generic function 'nf90_put_att' at (1) is not consistent with a
>>>> specific intrinsic interface
>>> There have been two separate reports about this on Lion. The full line
>>> in bintraj.F90 is
>>>
>>> call checkNCerror(nf90_put_att(vel_ncid, VelocVarID, "scale_factor",&
>>> 20.455), "define velocity scale_factor")
>>>
>>> I don't have Lion myself, but suggest putting quotes around "20.455" to see
>>> if that helps. (Lack of quotes seems to be the distinguishing feature of this
>>> call to nf90_put_att compared to all the others.
>>>
>>> (Similar instructions for earlier versions of Amber.)
>>>
>>> Of course, this will have to be tested for functionality as well.
>>>
>>> ....dac
>>>
>>> _______________________________________________
>>> AMBER mailing list
>>> AMBER.ambermd.org
>>> http://lists.ambermd.org/mailman/listinfo/amber
>>>
>>>
>>
>> --
>> Dr. Arthur "Audie" Roberts, Ph.D.
>> University of Georgia
>> Department of Pharmaceutical and Biomedical Sciences
>> 250 W. Green St.
>> Pharmacy South, Room 424
>> Athens, GA 30602
>> email: audie.uga.edu
>> alt: aroberts99163.yahoo.com
>> office: 706-542-7787
>> lab: 706-542-5979
>> fax: 706-542-5358
>> cell: 206-850-7468
>> skype=aroberts92122
>> For urgent matters, text me at 206-850-7468.
>>
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
> _______________________________________________
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>
>
>
--
Dr. Arthur "Audie" Roberts, Ph.D.
University of Georgia
Department of Pharmaceutical and Biomedical Sciences
250 W. Green St.
Pharmacy South, Room 424
Athens, GA 30602
email: audie.uga.edu
alt: aroberts99163.yahoo.com
office: 706-542-7787
lab: 706-542-5979
fax: 706-542-5358
cell: 206-850-7468
skype=aroberts92122
For urgent matters, text me at 206-850-7468.
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Received on Sun May 20 2012 - 19:30:03 PDT
