Use the 'atomicfluct' command in ptraj or cpptraj (see the manual for
command syntax). Make sure you RMS-fit your trajectory to a suitable
reference beforehand.
-Dan
On Sat, Apr 28, 2012 at 5:42 AM, Acoot Brett <acootbrett.yahoo.com> wrote:
> Dear All,
> Will you please tell me a method or a server which can calculate the mean B factor of all residues in a PDB file?
> Cheers,
> Acoot
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Received on Sat Apr 28 2012 - 07:00:03 PDT
